- AdMaS – Advanced Materials, Structures and Technologies – www.admas.eu
- ALISI – Application Laboratories of Advanced Microtechnologies and Nanotechnologies – http://alisi.isibrno.cz
- Institute of Molecular and Translational Medicine – http://imtm.cz
- Biomedical Centre of the Faculty of Medicine in Pilsen – www.biomedic-plzen.cz
- Centres for materials research at FCH BUT – www.materials-research.cz
- The Centre of Security, Information and Advanced Technologies (CEBIA-Tech) www.utb.cz
- Centre of the New Technologies and Materials –http://ntc.zcu.cz
- Centre of Polymer Systems – http://cps.utb.cz
- Center for Advanced Microbiology & Immunology Research in Veterinary Medicine – www.admirevet.cz
- Centre for nanomaterials, advanced technologies and innovation – http://cxi.tul.cz
- Centre of the Region Haná for Biotechnological and Agricultural Research – www.cr-hana.eu
- Centre of Engineering Research & Development Liberec – www.vuts.cz
- Center of Algal Biotechnology Třeboň (Algatech) – www.alga.cz
- Centre of sensor, information and communication systems – www.six.feec.vutbr.cz
- Research and Technology Centre of Renewable Energy Sources – www.cvvoze.cz
- CETOCOEN – www.cetocoen.cz
- Transport R&D Centre – www.cdvplus.cz
- ENET – Energy Units for Utilization of non Traditional Energy Sources – http://enet.vsb.cz
- ExAM Experimental Animal Models – www.iapg.cas.cz
- HiLASE: New lasers for industry and research – www.hilase.cz
- Inovation for Efficiency and Environment – http://vec.vsb.cz
- Institute of clean technologies for mining and utilization of raw materials for energy use – http://ict.hgf.vsb.cz
- Institute of environmental technologies – www.ietech.eu
- South Bohemian Research Center of Aquaculture and Biodiversity of Hydrocenoses – www.frov.jcu.cz
- Membrane Innovation Centre – www.membrain.cz
- National institute of Mental Health – www.nudz.cz
- NETME Centre (New Technologies for Mechanical Engineering) – http://netme.cz
- The Research Institute of Pomology – www.vsuo.cz
- Vehicle Center of Sustainable Mobility – www.cvum.eu
- Regional Centre for Applied Molecular Oncology (RECAMO) –www.recamo.cz
- Regional Centre of Advanced Technologies and Materials – www.rcptm.com
- Regional Center for Specialized Optical and Optoelektronic Systems – http://toptec.eu
- Regional Innovation Centre for Electrical Engineering (RICE) – http://rice.zcu.cz
- Regional materials science and technology centre – www.rmtvc.cz
- Regional Technological Institute – RTI – http://rti.zcu.cz
- Regional R&D center for low-cost plasma and nanotechnology surface modifications – http://ceplant.cz
- Sustainable Energy – http://susen2020.cz
- Unipetrol Centre of Research and Education – www.unicre.cz
- University center for energy Efficient buildings (UCEEB) – www.uceeb.cz
- West-Bohemian Centre of Materials and Metallurgy – www.comtesfht.com